BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB009A10SP1|AL425970
(793 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1334 1530 0.0
>3x_Contig1334
Length = 7302
Score = 1530 bits (770), Expect = 0.0
Identities = 789/794 (99%), Gaps = 2/794 (0%)
Strand = Plus / Minus
Query: 1 atcttggtacctgnactcttgtaggtatacttgtgaaatatggtagccaatcgatcagtg 60
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3828 atcttggtacctg-actcttgtaggtatacttgtgaaatatggtagccaatcgatcagtg 3770
Query: 61 atgcgactacgatgctcgacaattcatggctaatcaagggtttctgctgtgaaa-ataca 119
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 3769 atgcgactacgatgctcgacaattcatggctaatcaagggtttctgctgtgaaacataca 3710
Query: 120 agcaggtgtgtttgtacagtcatgaatacgagtattattgggccatgcttgttttgcatg 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3709 agcaggtgtgtttgtacagtcatgaatacgagtattattgggccatgcttgttttgcatg 3650
Query: 180 gggatttgttctggcgcaggggaattagtggcgacttgccaacaggatatgatcagtggg 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3649 gggatttgttctggcgcaggggaattagtggcgacttgccaacaggatatgatcagtggg 3590
Query: 240 agcaagaatacatacgcgctaacggccttgcggaatcaatatttgaattcagttaaggcg 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3589 agcaagaatacatacgcgctaacggccttgcggaatcaatatttgaattcagttaaggcg 3530
Query: 300 ttttctctatatagattgagggtaataccctcctgcacatttagagaattgacatcggaa 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3529 ttttctctatatagattgagggtaataccctcctgcacatttagagaattgacatcggaa 3470
Query: 360 gcttgctatccgcatcgttagggtaccttcttgttctttgttctattacagaagttgaga 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3469 gcttgctatccgcatcgttagggtaccttcttgttctttgttctattacagaagttgaga 3410
Query: 420 gaagttgaagaaagaaaaaataaactagagacttaagactaaaagattaaagaatctcgt 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3409 gaagttgaagaaagaaaaaataaactagagacttaagactaaaagattaaagaatctcgt 3350
Query: 480 ttgagtattctggacattataaaagatagagggacaggagaagaagtaaggaagtwaggt 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 3349 ttgagtattctggacattataaaagatagagggacaggagaagaagtaaggaagtaaggt 3290
Query: 540 actggcatttatagaaaaatagctacctcaattagatccctcattcagcaaaaaattgcc 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3289 actggcatttatagaaaaatagctacctcaattagatccctcattcagcaaaaaattgcc 3230
Query: 600 caacgattttgtgctcgtctatyatgaatggttttgatatagataatagtatgaracagt 659
|||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||
Sbjct: 3229 caacgattttgtgctcgtctataatgaatggttttgatatagataatagtatgaaacagt 3170
Query: 660 cccaattggaaatgccatatccaaatgagggcgaaggcgggcagcaccaaaatacccatg 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3169 cccaattggaaatgccatatccaaatgagggcgaaggcgggcagcaccaaaatacccatg 3110
Query: 720 agtttgcaacatcttacgatgctgaagaggatcccaacgatgttgacaaccattcgatta 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3109 agtttgcaacatcttacgatgctgaagaggatcccaacgatgttgacaaccattcgatta 3050
Query: 780 gtacccatttttca 793
||||||||||||||
Sbjct: 3049 gtacccatttttca 3036
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5526
Number of Sequences: 1807
Number of extensions: 5526
Number of successful extensions: 32
Number of sequences better than 1.0e-20: 1
length of query: 793
length of database: 10,358,551
effective HSP length: 16
effective length of query: 777
effective length of database: 10,329,639
effective search space: 8026129503
effective search space used: 8026129503
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)